Complete mitochondrial genome sequencing of <i>Anchisquilla fasciata</i> and phylogenetic analysis of the Squillidae

Zhang Qianyu; Ma Jiale; Ye Yingying; Li Jiji

doi:10.12284/hyxb2025110

Volume 47 Issue 9

Sep. 2025

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Zhang Qianyu，Ma Jiale，Ye Yingying, et al. Complete mitochondrial genome sequencing of Anchisquilla fasciata and phylogenetic analysis of the Squillidae[J]. Haiyang Xuebao，2025, 47(9)：129–144 doi: 10.12284/hyxb2025110

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Zhang Qianyu，Ma Jiale，Ye Yingying, et al. Complete mitochondrial genome sequencing of Anchisquilla fasciata and phylogenetic analysis of the Squillidae[J]. Haiyang Xuebao，2025, 47(9)：129–144 doi: 10.12284/hyxb2025110

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Complete mitochondrial genome sequencing of Anchisquilla fasciata and phylogenetic analysis of the Squillidae

doi: 10.12284/hyxb2025110

Zhang Qianyu^1
,,
Ma Jiale^{1, 2},
Ye Yingying^{1, 2
,
,},
Li Jiji^{1, 2
,
,}

1.
Marine Science and Technology College, Zhejiang Ocean University, Zhoushan 316022, China
2.
National Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan 316022, China

Received Date: 2025-03-10
Rev Recd Date: 2025-05-19
Publish Date: 2025-09-30

Abstract

Abstract

Anchisquilla fasciata belongs to the Squillidae (Latreille, 1802). In this study, the complete mitochondrial genome of Anchisquilla fasciata was obtained through next-generation sequencing technology. Analysis of the basic structural characteristics of the genome revealed that it contains a total of 37 genes, including 13 protein-coding genes (PCGs), 2 rRNA genes, and 22 tRNA genes. Analysis of nucleotide composition showed that A had the highest content at 35.42%, while G had the lowest content at 12.83%. Selection pressure analysis was conducted on the mitochondrial genomes of 11 species within the Squillidae, and it was found that all PCGs were under purifying selection. Additionally, a phylogenetic tree was constructed using the 13 PCGs of mitochondrial genomes from two subclasses of Malacostraca, revealing that the Squillidae forms a monophyletic group with species within the family branching off into a distinct clade, showing clear differentiation from other related Hoplocarida (such as the Lysiosquillidae). Comparison of mitochondrial gene rearrangements within Malacostraca showed that the Stomatopoda did not exhibit any rearrangements. The reconstructed chronogram of divergence times within the Hoplocarida indicated that the earliest diversification of existing species occurred during the Cretaceous period of the Mesozoic era, with a significant diversification of species in the Cenozoic era. These results will provide better insights into the phylogenetic relationships among different species of Squillidae and the evolutionary positions and relationships among subclasses within Malacostraca.
- Squillidae,
- Stomatopod,
- mitochondrial genome,
- phylogenetic analysis,
- divergence time

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References(88)

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