Message Board

Respected readers, authors and reviewers, you can add comments to this page on any questions about the contribution, review, editing and publication of this journal. We will give you an answer as soon as possible. Thank you for your support!

Full name
E-mail
Phone number
Title
Message
Verification Code
YAO Peng, YU Zhi-gang. Anaerobic ammonium-oxidizing bacteria and anaerobic ammonium oxidation (anammox) in the marine environment[J]. Haiyang Xuebao, 2011, 33(4): 1-8.
Citation: YAO Peng, YU Zhi-gang. Anaerobic ammonium-oxidizing bacteria and anaerobic ammonium oxidation (anammox) in the marine environment[J]. Haiyang Xuebao, 2011, 33(4): 1-8.

Anaerobic ammonium-oxidizing bacteria and anaerobic ammonium oxidation (anammox) in the marine environment

  • Received Date: 2010-01-29
  • Anaerobic ammonium oxidation (anammox) is the process of microbiological conversion of ammonium to dinitrogen gas and is mainly employed in waste water engineers. In recent years, it was found that anammox was widely distributed in the marine environments and played an important role in marine nitrogen cycle, and influenced the carbon cycle and global climate change. It has been recognized as a major pathway for the removal of fixed N from the marine ecosystem. Ladderane lipids are unique chemical biomarkers of anaerobic ammonium-oxidizing bacteria, and have potential implication for chemotaxonomy and paleooceangraphy. Anaerobic ammonium-oxidizing bacteria and anaerobic ammonium oxidation have become hot-spot research fields in the marine biogeochemistry, microbiology and organic geochemistry.
  • loading
  • KUENEN J G. Anammox bacteria: from discovery to application[J]. Nature Reviews Microbiology, 2008, 6: 320-326.
    BRODA E. Two kinds of lithotrophs missing in nature [J]. Zeitschrift für allgemeine Mikrobiologie, 1977, 17: 491-493.
    VAN DE GRAAF A A, MULDER A, SLIJKHUIS H, et al. Anoxic ammonium oxidation . Proceedings of the Fifth European Congress on Biotechnology. Denmark: Munksgaard International Publisher, 1990: 388-391.
    MULDER A, VAN DE GRAAF A A, ROBERTSON L A, et al. Anaerobic ammonium oxidation discovered in a denitrifying fluidized bed reactor[J]. FEMS Microbiology Ecology, 1995, 16: 177-184.
    KUYPERS M M M, SLIEKERS A O, LAVIK G, et al. Anaerobic ammonium oxidation by anammox bacteria in the Black Sea[J]. Nature, 2003, 422: 608-611.
    KUYPERS M M M, LAVIK G, WOEBKEN D, et al. Massive nitrogen loss from the Benguela upwelling system through anaerobic ammonium oxidation[J]. Proceedings of the National Academy of Sciences USA, 2005, 102:6478-6483.
    STROUS M, PELLETIER E, MANGENOT S, et al. Deciphering the evolution and metabolism of an anammox bacterium from a community genome[J]. Nature, 2006, 440: 790-794.
    HAMERSLEY R M, LAVIK G, WOEBKEN D, et al. Anaerobic ammonium oxidation in the Peruvian oxygen minimum zone[J]. Limnology and Oceanography, 2007, 52: 923-933.
    RATTRAY J E, VAN DE VOSSENBERG J, HOPMANS E C, et al. Ladderane lipid distribution in four genera of anammox bacteria [J]. Archives of Microbiology, 2008, 190: 51-66.
    JAESCHKE A, ROOKS C, TRIMMER M. Comparison of ladderane phospholipid and core lipids as indicators for anaerobic ammonium oxidation (anammox) in marine sediments[J]. Geochimica et Cosmochimica Acta, 2009, 73: 2077-2088.
    STROUS M, FUERST J A, KRAMER E H M, et al. Missing lithotroph identified as new planctomycete[J]. Nature, 1999, 400:446-449.
    RATTRAY J E, HOPMANS E C, SCHOUTEN S. Control and distribution of anammox bacteria and ladderane lipids . Texel: Royal Netherlands Institute for Sea Research, 2007.
    SCHMID M C, TWACHTMANN U, KLEIN M, et al. Molecular evidence for genus level diversity of bacteria capable of catalyzing anaerobic ammonium oxidation[J]. Systematic and Applied Microbiology, 2000, 23: 93-106.
    SCHMID M C, RISGAARD-PETERSEN N, VAN DE VOSSENBERG J, et al. Anaerobic ammonium-oxidizing bacteria in marine environments: widespread occurrence but low diversity[J]. Environmental Microbiology, 2007, 9:1476-1484.
    KARTAL B, RATTRAY J, VAN NIFTRIK L, et al. Candidatus "Anammoxoglobus propionicus" gen. nov., sp. nov., a new propionate oxidizing species of anaerobic ammonium oxidizing bacteria[J]. Systematic and Applied Microbiology, 2007, 30: 39-49.
    FUERST J A. Intracellular compartmentation in planctomycetes[J]. Annual Review of Microbiology, 2005, 59: 299-328
    VAN NIFTRIK L, GEERTS W J C, VAN DONSELAAR E G, et al. Combined structural and chemical analysis of the anammoxosome: a membranebounded intracytoplasmic compartment in anammox bacteria[J]. Journal of Structural Biology, 2008, 161: 401-410.
    SINNINGHE DAMST J S, STROUS M, RIJPSTRA W I C, et al. Linearly concatenated cyclobutane lipids from a dense bacterial membrane[J]. Nature, 2002, 419: 708-712.
    BOUMANN H A, HOPMANS E C, VAN DE LEEMPUT I, et al. Ladderane phospholipids in anammox bacteria comprise phosphocholine and phosphoethanolamine headgroups[J]. FEMS Microbiology Letters, 2006, 258: 297-304.
    BOUMANN H A, STROEVE P, LONGO M L. Biophysical properties of membrane lipids of anammox bacteria: Ⅱ. Impact of temperature and bacteriohopanoids[J]. Biochimica et Biophysica Acta, 2009, 1788: 1452-1457.
    WARD B B, DEVOL A H, RICH J J. Denitrification as the dominant nitrogen loss process in the Arabian Sea[J]. Nature, 2009, 461: 78-82.
    BRANDES J A, DEVOL A H. A global marine-fixed nitrogen isotopic budget: implications for Holocene nitrogen cycling[J]. Global Biogeochemical Cycles, 2002, 16: 1120, doi: 10.1029/2001GB001856.
    NAQVI S W A, VOSS M, MONTOYA J P. Recent advances in the biogeochemistry of nitrogen in the ocean[J]. Biogeosciences Discussions, 2008, 5: 1119-1137.
    SCHOUTEN S, STROUS M, KUYPERS M M M, et al. Stable carbon isotopic fractionations associated with inorganic carbon fixation by anaerobic ammonium-oxidizing bacteria[J]. Applied and Environmental Microbiology, 2004, 70: 3785-3788.
    郭建华, 彭永臻. 异养硝化、厌氧氨氧化及古菌氨氧化与新的氮循环[J]. 环境科学学报, 2008, 28: 1489-1498.
    THAMDRUP B, DALSGAARD T. Production of N2 through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments[J]. Applied and Environmental Microbiology, 2002, 68: 1312-1318.
    DALSGAARD T, CANFIELD D E, PETERSEN J, et al. N2 production by the anammox reaction in the anoxic water column of Golfo Dulce, Costa Rica[J]. Nature, 2003, 422: 606-608.
    RYSGAARD S, GLUD R N. Anaerobic N2 production in artic sea ice[J]. Limnology & Oceanography, 2004, 49: 86-94.
    TRIMMER M, NICHOLLS J C, DEFLANDRE B. Anaerobic ammonium oxidation measured in sediments along the Thames Estuary, United Kingdom[J]. Applied and Environmental Microbiology, 2003, 69: 6447-6454.
    THAMDRUP B, JENSEN M M, DALSGAARD T, et al. Anaerobic ammonium oxidation in the oxygen-deficient water off northern Chile[J]. Limnology & Oceanography, 2006, 51: 2145-2156.
    WOEBKEN D, FUCHS B M, KUYPERS M M M, et al. Potential interactions of particle-associated anammox bacteria with bacterial and archaeal partners in the Namibian upwelling system[J]. Applied and Environmental Microbiology, 2007, 73:4648-4657.
    JAESCHKE A, HOPMANS E C, WAKEHAM S G, et al. The presence of ladderane lipids in the oxygen minimum zone of the Arabian Sea indicates nitrogen loss through anammox[J]. Limnology and Oceanography, 2007, 52: 780-786.
    KARTAL B, KUYPERS M M M, LAVIK G, et al. 2007. Anammox bacteria disguised as denitrifiers: nitrate reduction to dinitrogen gas via nitrite and ammonium[J]. Environmental Microbiology, 2007, 9: 635-642.
    FRANCIS C A, BEMAN J M, KUYPERS M M M. New processes and players in the nitrogen cycle: the microbial ecology of anaerobic and archaeal ammonia oxidation[J]. The ISME Journal: Multidisciplinary Journal of Microbial Ecology, 2007, 1: 19-27.
    PENTON C R, DEVOL A H, TIEDJE J M. Molecular evidence for the broad distribution of anaerobic ammonium-oxidizing bacteria in freshwater and marine sediments[J]. Applied and Environmental Microbiology, 2006, 72: 6829-6832.
    GAL N A, MOLINA V, THAMDRUP B, et al. Anammox bacteria and the anaerobic oxidation of ammonium in the oxygen minimum zone off northern Chile[J]. Deep-Sea Research: Ⅱ, 2009, 56: 1021-1031.
    SHU Qing-long, JIAO Nian-zhi. Different Planctomycetes diversity patterns in latitudinal surface seawater of the open sea and in sediment[J]. Journal of Microbiology, 2008, 46: 154-159.
    SCHUBERT C J, DURISCH-KAISER E, WEHRLI B, et al. Anaerobic ammonium oxidation in a tropical freshwater system (Lake Tanganyika)[J]. Environmental Microbiology, 2006, 8: 1857-1863.
    HAMERSLEY M R, WOEBKEN D, BOEHRER B. Water column anammox and denitrification in a temperate permanently stratified lake (Lake Rassnitzer, Germany)[J]. Systematic and Applied Microbiology, 2009, 32(8): 571-582.
    ZHANG Ying, RUAN Xiao-hong, OP DEN CAMP H J M, et al. Diversity and abundance of aerobic and anaerobic ammonium-oxidizing bacteria in freshwater sediments of the Xinyi River (China)[J]. Environmental Microbiology, 2007, 9: 2375-2382.
    李涛, 王鹏, 汪品先. 南海南部陆坡表层沉积物细菌和古菌多样性[J]. 微生物学报, 2008, 48: 323-329.
    李涛, 王鹏, 汪品先. 南海西沙海槽表层沉积物微生物多样性[J]. 生态学报, 2008, 28: 1166-1173.
    洪义国, 李猛, 顾继东. 海洋氮循环中细菌的厌氧氨氧化[J]. 微生物学报, 2009, 49: 281-286.
    SCHMID M, MAAS B, DAPENA A, et al. Biomarkers for in situ detection of anaerobic ammonium-oxidizing (anammox) bacteria[J]. Applied and Environmental Microbiology, 2005, 71: 1677-1684.
    SHIMAMURA M, NISHIYAMA T, SHIGETOMO H, et al. Isolation of a multiheme protein with features of a hydrazine-oxidizing enzyme from an anaerobic ammonium-oxidizing enrichment culture[J]. Applied and Environmental Microbiology, 2007, 73: 1065-1072.
    RATTRAY J E, STROUS M, OP DEN CAMP H J M, et al. A comparative genomics study of genetic products potentially encoding ladderane lipid biosynthesis[J]. Biology Direct, 2009, 4: 8, doi: 10.1186/1745-6150-4-8.
    贺纪正, 张丽梅. 氨氧化微生物生态学与氮循环研究进展[J]. 生态学报, 2009, 29: 406-415.
    舒青龙, 焦念志, 汤坤贤. 海洋厌氧氨氧化细菌分子生态学研究进展[J]. 微生物学通报, 2009, 36: 1758-1765.
    SINNINGHE DAMST J S, RIJPSTRA W I C, GEENEVASEN J A J, et al. Structural identification of ladderane and other membrane lipids of planctomycetes capable of anaerobic ammonium oxidation (anammox)[J]. FEBS Journal, 2005, 272: 4270-4283.
    LIPP J S, HINRICHS K U. Structural diversity and fate of intact polar lipids in marine sediments[J]. Geochimica et Cosmochimica Acta, 2009, 73(22): 6816-6833.
    HOPMANS E C, KIENHUIS M V, RATTRAY J E, et al. Improved analysis of ladderane lipids in biomass and sediments using high-performance liquid chromatography/atmospheric pressure chemical ionization tandem mass spectrometry[J]. Rapid Communications in Mass Spectrometry, 2006, 20: 2099-2103.
    JAESCHKE A, ABBAS B, ZABEL M, Et al. Molecular evidence for anaerobic ammonium oxidizing (anammox) bacteria in continental shelf and slope sediments off northwest Africa[J]. Limnology and Oceanography, 2010, 55: 365-376.
    STURT H F, SUMMONS R E, SMITH K, et al. Intact polar membrane lipids in prokaryotes and sediments deciphered by high-performance liquid chromatography/electrospray ionization multistage mass spectrometry-New biomarkers for biogeochemistry and microbial ecology[J]. Rapid Communications in Mass Spectrometry, 2004, 18: 617-628.
    姚鹏, 于志刚. 海洋沉积物中现存微生物化学标志物完整极性膜脂研究进展[J]. 地球科学进展, 2010, 25(5): 474-483.
  • 加载中

Catalog

    通讯作者: 陈斌, bchen63@163.com
    • 1. 

      沈阳化工大学材料科学与工程学院 沈阳 110142

    1. 本站搜索
    2. 百度学术搜索
    3. 万方数据库搜索
    4. CNKI搜索
    Article views (4417) PDF downloads(4097) Cited by()
    Proportional views
    Related

    /

    DownLoad:  Full-Size Img  PowerPoint
    Return
    Return