Bacterial diversity in the sediments collected from the Northwest Pacific

MU Chun-hua; BAO Zhen-min; CHEN Gang; HAO Lu-jiang; QI Zi-zhong; LAO Jun; LI Guang-xue; HU Jing-jie

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Article Navigation > Haiyang Xuebao > 2006 > 28(4): 121-128

MU Chun-hua, BAO Zhen-min, CHEN Gang, HAO Lu-jiang, QI Zi-zhong, LAO Jun, LI Guang-xue, HU Jing-jie. Bacterial diversity in the sediments collected from the Northwest Pacific[J]. Haiyang Xuebao, 2006, 28(4): 121-128.

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Bacterial diversity in the sediments collected from the Northwest Pacific

1.
Laboratory of Marine Genetics and Breedings(MGB), Division of Life Science and Technology, Ocean University of China, Qingdao 266003, China
2.
College of Marine Geosciences, Ocean University of China, Qingdao 266003, China

Received Date: 2005-08-30
Rev Recd Date: 2005-12-28

Abstract

Abstract

Diversity of bacteria was studied in deep-sea sediments from the Northwest Pacific by PCR, RFLP and sequence analysis of 16S rDNA and comparing with the published sequences in GenBank database.Based on the RFLP profile generated, 77 clones from the 16 s rDNA library were divided into 27 types.Phylogenetic analysis showed that the 27 independent clones fell into four groups:Proteobacteria (62.96%), Chloroflexi (14.81%), Planctomycetes (14.81%) and Acidobacteria (7.41%).Among all sequenced clones, 6 were related to the sulfate metabolism bacteria and the results also demonstrated that some bacteria in deep-sea sediments had relation to matter energy circulation.
- the Northwest Pacific,
- sediments of deep-sea,
- bacteria,
- diversity

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References

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