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2022 Vol. 44, No. 4

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cover
2022, 44(4)
Abstract:
2022, 44(4): 1-3.
Abstract:
Marine Biology
Progress and prospect of bacterial membrane vesicles in marine ecosystem
Zhao Jing, Jia Chenzheng, Wang Kai, Zhang Beibei
2022, 44(4): 1-11. doi: 10.12284/hyxb2022140
Abstract:
Bacterial membrane vesicles (MVs), which are a kind of biological nanoparticles carrying proteins, nucleic acids, signaling molecules, and other important compounds, are involved in a variety of physiological and biochemical processes, such as horizontal gene transfer, quorum sensing, biofilm formation and so on. Studies showed that marine extracellular vesicles might be the third largest biological entity except for phages and bacteria. Besides, MVs-mediated intercellular communication across species could be of great significance to marine ecosystems. However, very little is known about the specific ecological role and biological function of MVs in the marine biosphere. In this review, we discuss the role of bacterial MVs in marine micro-ecology, marine symbiotic system, and the impact of MVs-mediated material delivery on marine ecosystem. Meanwhile, we also put forward some questions and opinions for study in marine bacterial MVs’ research.
Annual changes in the community structure and diversity of fish eggs and larvae in the Huanghe River Estuary and its adjacent waters
Yang Yanyan, Zhu Mingming, Feng Yinyin, Li Huanjun, Chen Wei, Wang Xiuxia, Chen Jianqiang, Su Haixia
2022, 44(4): 36-46. doi: 10.12284/hyxb2022074
Abstract:
In order to understand the community structure dynamics of fish eggs and larvae in the estuarine waters, four surveys were conducted in the coastal waters of the Huanghe River Estuary in June of 2014, 2015, 2017, and 2018. According to the species composition and quantitative distribution of fish eggs and larvae, the resource distribution of fish eggs and larvae in this water area was comprehensively studied by using the methods of biodiversity index, R software clustering and Pearson correlation matrix analysis. The results showed that a total of 3 829 fish eggs and 234 larvae were collected during the four surveys by horizontal trawl with plankton net. The obtained fish eggs and larvae belonged to 7 orders, 14 families and 15 genera. The dominant species of eggs were Engraulis japonicus and Cynoglossus joyeri. The dominant species of larvae were Konosirus punctatus and Gobiidae sp. All biodiversity indexes were the highest in 2015 and the lowest in 2018. Used the R language to cluster the similarity of the species composition between fish eggs and larvae, and divided the 4 survey years into 3 groups, each grouping the main divergent species were E. japonicus. The results of Pearson correlation matrix showed that salinity was closely related to the biodiversity of fish eggs and larvae. The analysis showed that the annual variation characteristics of community distribution and diversity of fish eggs and larvae in the Huanghe River Estuary and adjacent waters reflected the response of fish to environmental variation.
Seasonal variations of the planktonic larvae community in the Huanghe River Estuary adjacent waters
Zuo Tao, Li Yongtao, Zuo Ming, Chen Zhaolong, Wang Jun, Wang Andong
2022, 44(4): 47-56. doi: 10.12284/hyxb2022092
Abstract:
Planktonic larvae are the necessary stages during the growth and development of many fishery species, such as shellfish, benthic fish, polychaete in the Huanghe River Estuary adjacent waters. Seasonal studies on the planktonic larvae community were carried out for biodiversity and bio-resource protection researches in the region. The larvae samples were collected from the vertical hauling of a mesh size 0.160 mm plankton net onboarding of six cruises during April 2019, June 2019, and August 2019, November 2019, January and April 2020 in the sea. Of the 16 planktonic larvae identified, 87% groups were meroplankton. The community diversity index (H') showed higher in June and August than in November and January. For the study region, the dominant organisms of planktonic larvae were bivalve larvae, nauplii, gastropoda larvae, polychaeta larvae, copepodite larvae, auricularia larvae. But the composition of dominant species varied with seasons, with the highest seasonal turnover rate (67%) from April to June, only bivalve larvae and nauplii dominated the planktonic larvae community for all seasons. Total planktonic larvae abundance reached the highest in November, the lowest in January. The planktonic larvae had their high abundance mostly near the estuaries of the Huanghe River and the Xiaoqinghe River, and in the middle part of Laizhou Bay. By cluster analysis, three assemblages of communities were differentiated based on the family compositions and their abundance at each station of six surveyed months. The representative species for monthly cluster groups were nauplii for spring (April) and winter (January) groups, bivalve larvae for summer-autumn (June to November) group. The station cluster groups overlapped geographically with the same representative species (bivalve larvae and nauplii). From statistical analysis of MANOVA and ANOSIM, biodiversity index, abundance, similarity among cluster groups presented significantly different among measured months, but stations, suggesting a seasonal variation for planktonic larvae community. Bio-environment multiple regression analysis showed that the combination of water temperature and zooplankton abundance had the most effects on the planktonic larvae community.
Study on temperature and salinity tolerance of Tapes dorsatus juveniles
Zhang Kexin, Cao Chutian, Liu Zhigang, Wu Jiaying, Zhang Yuan, Zhan Jianqiang, Chen Linguang
2022, 44(4): 57-64. doi: 10.12284/hyxb2022094
Abstract:
In order to investigate the tolerance of temperature and salinity of Tapes dorsatus juveniles, ecological methods with the laboratory controlled system was used in this study. The results showed that: (1) in the temperature tolerance test, juveniles maintained 90%−100% survival rate at the low-temperature groups (4℃, 6℃, 8℃ and 10℃) for 0 d, 2 d, 3 d and 7 d and at the high-temperature groups (33℃, 34℃, 35℃ and 36℃) for 5 d, 4 d, 1 d and 0 d, respectively; (2) under temperature stress, at the low-temperature groups, the semilethal temperatures at 48 h, 96 h, 144 h and 192 h were 5.02℃, 7.68℃, 9.01℃ and 9.20℃. And in the high-temperature groups, the semilethal temperatures at 48 h, 96 h, 144 h and 192 h were 35.44℃, 34.74℃, 34.43℃ and 34.25℃, respectively. In the salinity tolerance test, (1) juveniles maintained 90%−100% survival rate at low-salinity groups (13.0, 15.6, 18.2, 20.8 and 23.4) for 1 d, 1 d, ≥9 d, ≥9 d and ≥9 d while in the high-salinity groups (41.6, 44.2, 46.8, 49.4 and 52.0) followed by 9 d, 2 d, 1 d, 1 d and 1 d, respectively; (2) the semilethal salinity at 48 h, 96 h, 144 h and 192 h in the low-salinity groups were 14.46, 16.02, 16.76 and 16.91, while in the high-salinity groups were >52.0, 51.79, 50.58 and 48.88, respectively; (3) for survival, the suitable and the optimum salinities of T. dorsatus juveniles were 16.91−48.20 and 18.20−41.60, respectively. For growth, the suitable and the optimum salinities were 23.58−45.15 and 33.90, respectively. The results indicated that T. dorsatus juveniles had strong tolerance to high temperature and were suitable for cultivation with higher temperatures in the southern sea area. The suitable survival salinity range was wide, and the optimal growth salinity was basically the same as the offshore sea water. T. dorsatus juveniles suitable for breeding in the offshore sea water.
Analysis of combining ability and heterosis of growth and comprehensive stress tolerance traits of Litopenaeus vannamei multi-generation breeding population
Wang Lun, Wang Chongyi, Liu Jianyong, Fu Xueli
2022, 44(4): 65-73. doi: 10.12284/hyxb2022064
Abstract:
This research aimed to screen the best mating combinations of Litopenaeus vannamei. Five populations of L. vannamei with different genetic backgrounds were used as parents, and 12 combinations of the F1 generation were constructed by mating. The ASReml4 software was used to estimate the general fitness (GCA) and specific fitness (SCA) for growth and tolerance to combined stress (high salt (35), low pH (6±0.1), and high ammonia nitrogen (70 mg/L) co-stress) traits of the 12 combinations of P105 in L. vannamei. The results showed that the SCA of the parents played a dominant role in the performance of offspring traits, with combinations K♀×K♂(0.35±0.25), GX♀×W♂(0.31±0.22) and GX♀×M♂(0.29±0.29) ranking high in SCA for body mass; combinations GX♀×GX♂(3.65±1.79), L♀×L♂(2.19±2.33) and W♀×GX♂(1.30±2.03) ranking high in SCA for tolerance to combined stress. The analysis of heterozygous dominance H showed that the crosses showed some heterozygous dominance for growth (body mass, body length, cephalothorax length, and full length of ventral segments) and stress tolerance traits, and the H for growth and stress tolerance traits of the six crosses GX♀×W♂, GX♀×K♂, GX♀×M♂, W♀×GX♂, K♀×GX♂ and K♀×M♂ were negative except for the combination GX♀×K♂ (0.10%−80.79% and 6.87%−42.86%), with the highest H for the combination GX♀×W♂ body mass (25.52%) and the higher H for the combination W♀×GX♂ tolerance to combined stress (41.72%). The study showed that the hybrid combination GX♀×W♂ had the highest SCA and H for body mass; the hybrid combination W♀×GX♂ had the highest SCA and higher H for tolerance to combined stress, which can be considered to enhance the application of the two combinations in matching crosses for growth and combined stress tolerance traits respectively.
Study on fish species diversity in the East China Sea in summer based on environmental DNA technology
Li Xiaoling, Liu Yang, Wang Congcong, Yu Yewei, Li Gang
2022, 44(4): 74-84. doi: 10.12284/hyxb2022088
Abstract:
To understand the species composition of the dominant fish species communities in the East China Sea and to monitor and protect their diversity, environmental DNA technology to analyze the species diversity of fish in the East China Sea was used in this study. Through the collection of seawater samples, eDNA extraction, amplification and high-throughput sequencing analysis, a total of 44 species of marine fishes in 2 classes, 23 orders, 29 families and 42 genera were detected, and most of the species were found in the traditional fishery resources survey in the East China Sea. Among them, the species with high relative abundance were red nose anchovy (Thryssa kammalensis), blue-spotted horse mackerel (Scomberomorus niphonius), Japanese mackerel (Scomber japonicus), small yellowtail (Larimichthys polyactis) and mullet (Mugil cephalus). The alpha diversity among stations was significant difference, and generally showed high biodiversity at coastal stations and high biological abundance at offshore stations. The results suggested that environmental DNA technology could quickly explore the diversity and spatial distribution of fish species in the East China Sea, as an effective supplementary to traditional fisheries resource monitoring.
Preliminary functional study of foxl2 in Portunus trituberculatus and analysis of its related miRNA
Zhang Mengqian, Zhang Jingyan, Ge Hongxing, Liu Ping, Li Jian, Meng Xianliang
2022, 44(4): 85-94. doi: 10.12284/hyxb2022060
Abstract:
The foxl2 plays essential roles in regulating ovarian differentiation, development and functional maintenance of vertebrate. However, its function in ovarian development of the swimming crab Portunus trituberculatus remains unknown. In the present study, we firstly cloned the full-length cDNA of P. trituberculatus foxl2 (Ptfoxl2) which contained a 5′ untranslated region (UTR) of 701 bp, a 3′ UTR of 211 bp, and an open reading frame (ORF) 1590 bp. Gene expression analysis in different tissues showed that Ptfoxl2 exhibited the highest expression in ovary. There were significant differences in its expression in different stages of ovarian development, and its expression was the highest in stage V. After eyestalk ablation, Ptfoxl2 expression decreased significantly. In addition, RNAi of Ptfoxl2 resulted in a significant reduction in vitellogenin expression of ovary. Taken together, these results indicated that Ptfoxl2 played an important role in the regulation of ovarian development of P. trituberculatus by inhibiting endogenous vitellogenesis in maturation stage. In order to further analyze the post-transcriptional regulation of Ptfoxl2, the miRNAs targeting Ptfoxl2 was predicted by bioinformatics analysis and the interaction between the miRNAs and Ptfoxl2 was verified using the dual luciferase reporter assay. The results showed that the relative luciferase activity was significantly reduced after co-transfection of miR-9 mimics and pmirGLO-Ptfoxl2-3′ UTR. Expression analysis showed that miR-9 exhibited opposite pattern at ovarian maturation stage and after eyestalk ablation. Collectively, the results demonstrated that miR-9 can regulate Ptfoxl2 expression in the swimming crab.
Knockout of Pseudoalteromonas marina pilZ gene inhibited the settlement and metamorphosis of Mytilus coruscus
Zhang Chi, Wang Jinsong, Yang Jinlong, Zhang Junbo, Wan Rong, Liang Xiao
2022, 44(4): 95-103. doi: 10.12284/hyxb2022090
Abstract:
To investigate the effect of Pseudoalteromonas marina pilZ gene knockout on the biofilm formation and its influence on the settlement and metamorphosis of Mytilus coruscus larvae, ΔpilZ was constructed by homologous recombination, and the changes in bacterial density, biofilm thickness, c-di-GMP level and extracellular polymeric substances (EPS) of ΔpilZ bacteria biofilm were analyzed, as well as the regulation of the settlement and metamorphosis of M. coruscus larvae. The results showed that compared with the wild-type strain, the biofilm formed by ΔpilZ strain significantly increased the biofilm thickness, the number of bacteria, while the contents of β-polysaccharides and proteins in EPS were decreased and the settlement and metamorphosis of M. coruscus larvae were inhibited (p<0.05). There was no significant difference in c-di-GMP level, α-polysaccharide and lipid contents (p>0.05). In conclusion, P. marina pilZ gene knockout can regulate the bacterial biofilm and the content of EPS including β-polysaccharides and proteins contents, then inhibit the settlement and metamorphosis of M. coruscus larvae.
Isolation and identification of cultivable bacteria isolated from deep-sea sediment samples of the Indian Ocean
Jiang Zhao, Zhang Weihua
2022, 44(4): 104-113. doi: 10.12284/hyxb2022070
Abstract:
In order to explore the diversity of pure cultured bacteria in the deep-sea sedimentary environment of the Indian Ocean, bacteria were isolated and identified from 12 sediment samples collected from the Indian Ocean. A total of 343 strains of bacteria were obtained by pure culture isolation method and 16S rRNA gene sequence analysis showed that these isolates belonged to Firmicutes, Proteobacteria, Actinobacteria, Bacteroidete and were divided into 5 classes, 13 orders, 26 families and 121 species under 39 genera. The dominant taxa were Streptomyces (separation rate is 16.53%) and Bacillus (separation rate is 8.26%), among which there were 12 potential new taxa. The results show that the deep-sea sedimentary environment of the Indian Ocean is rich in culturable bacteria and contains many new species; secondly, the isolation and culture methods are directly related to the bacterial species diversity obtained from marine sediments.
Marine Geology
Salt characteristics and sedimentary environment analysis of deep soft soil in the Changjiang River Estuary
Gou Fugang, Gong Xulong, Zhang Yan, Yang Lumei, Liu Yan
2022, 44(4): 12-22. doi: 10.12284/hyxb2022078
Abstract:
The salt-containing characteristics of soft soil are an important indicator of foundation design, and salt-containing features are mainly protected by deposition environment, often with strong geographicalism. In the Changjiang River Ekimae, the softener of the Changjiang River Ekimae is a research object, collecting multi-sets of soil samples for indoor trials, and conducts salt-containing characteristics, parameter correlation and deposition environment analysis. The results show that the salt-containing salt is NaCl type, the salt content is 0.613%, mainly based on weak saline soil, accounting for 85.4%. The salt content, Cl content, Na+ content, K+ content peak test meets the regular distribution, but the reputation test value is located in the rejection domain, and does not belong to normal distribution. Other ion assumptions and peak tests do not comply with the right to distribution. The salt content of soft soil is highest in relationship with Clcontent, and is good to ion-relevance to the Ca2+ content and \begin{document}${\rm{CO}}_3^{2-} $\end{document}. The content of the soil-solvent Cl content and salt content, the \begin{document}${\rm{SO}}_4^{2-} $\end{document} content is equipped with the highest multiplication effect; Cl content is best fitted with Na+, Ca2+, Mg2+, K+, \begin{document}${\rm{HCO}}_3^- $\end{document} contents fitted to polynomial fitting effect. The soft soil is deposited by an alkaline environment. The sodium adsorption ratio of soft soil is 54.35, which is close to the sodium adsorption ratio of seawater, indicating that the salt-containing characteristics retains the seawater characteristics, and with the increase of depth, soft soil sodium adsorption ratio has reduced trend. The soft soil formation time is related, the older the formation of soft soil, the longer the time of penetration. The Sr/ Ba value of the soft soil is much greater than 1, indicating that the soil deposition environment is a marine environment. The γMgCa value in the soft soil leaching solution is much higher than the γMgCa background value, which is subjected to seawater dipping. The seawater mixing model is introduced, and the seawater mixing ratio is calculated. The low value of the seawater mixing ratio is mainly distributed in the west far away from the coast, and the soil deposition in this area is mainly controlled by the water of the Changjiang River. The high value of seawater mixing ratio is mainly distributed in coastal areas, where soil deposits are mainly controlled by transgression, and the marine facies attributes are heavier.
Characteristics and inducing factors of geological hazards around the central rift in the West Philippine Basin
Sun Meijing, Luo Weidong, Chen Hongjun, Hu Xiaosan, Huang Wenkai, Du Wenbo, Zhou Jiao, Han Yanfei, Liu Jie
2022, 44(4): 23-35. doi: 10.12284/hyxb2022080
Abstract:
Based on the latest measured high-resolution shallow profile and multibeam bathymetric data in the West Philippine Basin in 2018, the marine geological disasters in the central rift and surrounding areas of the West Philippine Basin is analyzed in this paper. In the study area, two types of disaster geological factors are identified: one is destructive geological factors, mainly including landslide, active fault, gully and magma diapir; the second is the restrictive geological factors, mainly seamounts, scarps and trenches. Based on the shallow seismic profile, the type, shape and internal structure characteristics of geological hazards bodies are described in detail. The distribution area and development characteristics are discussed. The main inducing factors and adverse effects of geological hazards are discussed. The identification of geological hazards, the delineation of distribution range and the analysis of causes in the study area can provide important geological basis for marine engineering construction, equipment design and maritime navigation, avoid adverse effects and make risk prediction in advance.
Marine Technology
Long term time series analysis and prediction of waves at Hainan offshore zone based on Prophet algorithm
Huang Xinyu, Tang Jun, Wang Xiaoyu
2022, 44(4): 114-121. doi: 10.12284/hyxb2022086
Abstract:
In recent years, various artificial intelligence algorithms based on big data have gradually emerged and have been applied in short-term time series wave forecasting. Based on the measured time series data of hourly waves in Hainan offshore from 2015 to 2019, a prediction model for long-term time series waves of Hainan offshore based on Prophet algorithm is established in this paper. The daily, monthly and annual variation characteristics of waves in Hainan offshore from 2015 to 2019 are analyzed, and the waves in Hainan offshore in 2020 are predicted. The results show that the predicted values of wave height and period by prophet algorithm model are in good agreement with the measured values. Prophet algorithm model can be effectively used for long-term wave characteristic analysis and time series prediction.
Numerical simulation of rip current in Jinsha Bay, Shenzhen based on XBeach model
Hu Pengpeng, Li Zhiqiang, Zhu Daoheng, Li Gaocong, Su Qianxin
2022, 44(4): 122-133. doi: 10.12284/hyxb2022076
Abstract:
Jinsha Bay is one of the most important tourist attractions in the Guangdong-Hong Kong-Macao Greater Bay Area and is favored by tourists from all over the world. The XBeach model is used to simulate the nearshore circulation of the Jinsha Bay, and the occurrence of rip current under different simulated wave conditions is studied. The results show that the rip current in the Jinsha Bay is largely affected by wave height and topography. Under the condition of annual mean significant wave height, there is no rip current along the Jinsha Bay. When the incident wave height exceeds a certain threshold, the risk of rip current increases. The intensity and offshore distance of the rip current are positively correlated with the incident wave height. When the wave direction is perpendicular to the coast, it is the best for the generation of rip current. The beach manager of the Jinsha Bay should improve the early warning of the wave condition in order to reduce the harm caused by the rip current. In addition, due to the characteristics of the long headland, the feeder current of the deflection rips generated by the Jinsha Bay comes from the alongshore currents of the headland and the beach. This can be verified by subsequent field observations. The work of this paper also provides some references for the domestic simulation research of rip current using XBeach model.
Marine Information Science
Comparative study on shallow water depth inversion based on GeoEye-1 and WorldView-2 remote sensing data
Lu Tianqi, Wu Zhifang, Ren Xiaosa, Yao Huimin, Shao Changgao
2022, 44(4): 134-142. doi: 10.12284/hyxb2022082
Abstract:
Accurate inversion of shallow water depth is essential for marine space management and ecological environment protection. Lingyang Reef of Xisha Islands in the South China Sea is taken as a typical study area. The single-band model, multi-band model and band-ratio model are established based on GeoEye-1 and WorldView-2 high-resolution multi-spectral remote sensing data and measured points. The results show that the correlation of the inversion model established with the participation of green band is generally high, while the multi-band model established by four bands combination has the highest accuracy and the correlation coefficient reaches 0.870 and 0.853, respectively. Comparing with the inversion accuracy of GeoEye-1 and WorldView-2 data in different depth ranges based on the above model, the conclusion is that the inversion errors of the two kinds of data in different depth ranges have the same trend, with the maximum value of the average relative errors occurring in the range of 0−5 m and the minimum value occurring in the range of 20−25 m. In general, the inversion accuracy of WorldView-2 image is higher than that of GeoEye-1 image. This study has a certain reference significance for the inversion of water depth in shallow tropical sea.
Sandy coastline fine extraction and correction method based on high resolution image
Yin Hang, Qi Hongshuai, Cai Feng, Zhang Chi, Liu Gen, Zhao Shaohua, Song Jiacheng, Zhao Guorun
2022, 44(4): 143-152. doi: 10.12284/hyxb2022084
Abstract:
The stable acquisition of large-scale and continuous coastline data through remote sensing is an important basis for the development of coastal zone research. Aiming at the problems of noise sensitivity and threshold instability in the traditional edge detection algorithm for high-resolution remote sensing images, the strected forests edge detection algorithm based on the structured random forest model is introduced to identify the sandy shoreline of the west coast of Haikou City, and proposed based on the Bruun-Dean balanced profile model, a new method of tide level correction is established to fit the profile model, and finally the fine coastline data is extracted. Based on the measured data, the precision evaluation and error analysis of the extraction results are carried out, and the prospects for method improvement and popularization and application are put forward. The research show that: (1) the result of the water edge line detected by the strected forests edge detection algorithm is clear and delicate, which is more accurate and efficient than the traditional edge detection operator methods such as Roberts operator, Canny operator, and LoG operator, and is suitable for the study of coastline extraction from high-resolution remote sensing images; (2) aiming at the tide level correction of the sandy coastline, the fitted profile model established based on the RTK measured data and the fitted profile model overcomes the large error of the traditional linear model and improves the accuracy and feasibility of the coastline correction; (3) based on actual measurement for the shoreline, the results are quantitatively analyzed using the section method, and it is verified that the positioning accuracy of the extracted shoreline is better than 2.5 m.
Remote sensing retrieval of phytoplankton group in the eastern China seas
Zhao Haiyang, Shen Fang, Sun Xuerong, Wei Xiaodao
2022, 44(4): 153-168. doi: 10.12284/hyxb2022062
Abstract:
Remote sensing retrieval of phytoplankton group can provide important data for a comprehensive understanding of the role of phytoplankton in marine ecosystem. However, due to the complex optical characteristics, there are still great challenges in the remote sensing retrieval of phytoplankton group in offshore waters. In this study, the eastern China seas region, a complex optical class II water body, is taken as the research area. By using three modeling methods, namely band combination method, multiple linear regression method based on singular value decomposition (SVD+MLR) and XGBoost regression method based on singular value decomposition (SVD+XGBoost), the phytoplankton group is retrieved from remote sensing reflectance (Rrs) data. Verified by the in-situ measured data set, the chlorophyll a (Chl a) concentration retrieval model of eight phytoplankton groups by SVD+XGBoost has the highest accuracy, and the determination coefficient (R2) of Chl a concentration inversion model of diatoms and dinoflagellates in the validation set is greater than 0.7. In contrast, the accuracy of Chl a concentration of chlorophytes, cyanobacteria and chrysophytes estimated by the three modeling methods is low (the R2 of the validation results is less than 0.45). At the same time, the applicability of three atmospheric correction methods of OLCI images (C2RCC, POLYMER and MUMM) in the eastern China seas is evaluated. The results show that compared with the other two atmospheric correction algorithms, C2RCC has better performance in each band (root mean square error is less than 0.0048 sr−1). Finally, the performance of the retrieval model on satellite images is verified by the in-situ data. The validation results show that the diatoms Chl a concentration model established by SVD+MLR has better accuracy (the R2 is 0.56), while the Chl a concentration inversion models of other phytoplankton groups have poor results.