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缢蛏(Sinonovacula constrictaGSTHSP90基因克隆及其在氨氮胁迫下的表达特征分析

张欢 董迎辉 姚韩韩 俞凯佳 胡月亚 林志华

张欢,董迎辉,姚韩韩,等. 缢蛏( Sinonovacula constricta) GST和 HSP90基因克隆及其在氨氮胁迫下的表达特征分析[J]. 海洋学报,2020,42(4):66–78,doi:10.3969/j.issn.0253−4193.2020.04.008
引用本文: 张欢,董迎辉,姚韩韩,等. 缢蛏( Sinonovacula constricta GST HSP90 基因克隆及其在氨氮胁迫下的表达特征分析[J]. 海洋学报,2020,42(4):66–78,doi:10.3969/j.issn.0253−4193.2020.04.008
Zhang Huan,Dong Yinghui,Yao Hanhan, et al. Cloning of GST and HSP90 genes of Sinonovacula constricta and analysis of their expression characteristics under ammonia nitrogen stress[J]. Haiyang Xuebao,2020, 42(4):66–78,doi:10.3969/j.issn.0253−4193.2020.04.008
Citation: Zhang Huan,Dong Yinghui,Yao Hanhan, et al. Cloning of GST and HSP90 genes of Sinonovacula constricta and analysis of their expression characteristics under ammonia nitrogen stress[J]. Haiyang Xuebao,2020, 42(4):66–78,doi:10.3969/j.issn.0253−4193.2020.04.008

缢蛏(Sinonovacula constrictaGSTHSP90基因克隆及其在氨氮胁迫下的表达特征分析

doi: 10.3969/j.issn.0253-4193.2020.04.008
基金项目: 国家现代贝类产业技术体系项目(CARS-49);浙江省农业新品种选育重大科技专项(2016C02055-9);国家水产种质资源平台运行服务项目(2019DKA30470);宁波市“环境科学与工程”一流学科项目。
详细信息
    作者简介:

    张欢(1994-),女,浙江省衢州市人,研究方向为海洋贝类种质资源与遗传育种研究。E-mail:MhuanhuanZ@126.com

    通讯作者:

    林志华,男,研究员,博士生导师,主要从事贝类遗传育种研究。E-mail:zhihua9988@126.com

  • 中图分类号: P714+.5; Q814

Cloning of GST and HSP90 genes of Sinonovacula constricta and analysis of their expression characteristics under ammonia nitrogen stress

  • 摘要: 克隆获得缢蛏(Sinonovacula constricta)谷胱甘肽S-转移酶(Sc-GSTσ)和热休克蛋白90(Sc-HSP90)基因的cDNA全长,分析了它们的组织表达差异及其在氨氮胁迫下的表达特征。结果表明,Sc-GSTσ的全长cDNA为1 414 bp,含有639 bp的开放阅读框(Open Reading Frame,ORF),编码212个氨基酸,Sc-GSTσ氨基酸序列与其他物种的GST氨基酸序列同源性为31.88%~43.40%;而Sc-HSP90的全长cDNA为2 752 bp,ORF为2 181 bp,编码726个氨基酸,其氨基酸序列与其他物种HSP90的氨基酸序列同源性为76.77%~87.05%。荧光定量PCR分析发现,Sc-GSTσSc-HSP90在缢蛏各组织中均有表达,两者均在肝胰腺中表达量最高。氨氮胁迫后,Sc-GSTσSc-HSP90 mRNA在肝胰腺中表达均显著上调(p<0.05),表明氨氮胁迫引起机体的应激反应,2个基因可能参与机体解毒或防御过程。但胁迫后期表达量下降推测是机体的防御能力有限,不足以完全保护宿主免受应激诱导的细胞损伤。
  • 图  1  Sc-GSTσ结构域和多重比较

    a. Sc-GSTσ的结构域与挑选的4种无脊椎动物的GSTσ和3种脊椎动物的前列腺素D合成酶(PGD,A GSTσ)结构域比较;b. 8种动物N末端结构域多重比较;c. 8种动物GSTσ C末端结构域多重比较

    Fig.  1  Sc-GSTσ domain structure and multiple sequence alignment

    a. The structure domains of Sc-GSTσ were compared with those of four selected other invertebrate GSTs and three vertebrate prostaglandin-D synthases (PGDS, a GSTσ); b. multiple sequence alignment of N-terminal domain from eight animals; c. multiple sequence alignment of GSTσ C-terminal domain from eight animals

    图  2  利用MEGA5.2软件邻接法构建的GST的系统进化树

    使用序列的登录号见附录表A1

    Fig.  2  The phylogenetic tree of GST constructed by Neighbor-joining method using MEGA5.2 software

    Accession numbers of the sequences used in construction of tree are attached in the appendix Table A1

    图  3  Sc-HSP90基因鉴定及系统进化树

    a. 8种动物HSP90氨基酸序列多重比较,红色方框为HSP90家族标签,保守序列MEEVD带有下划线;b. 利用MEGA5.2软件采用邻接法构建的HSP90的系统进化树。使用序列的登录号见附录表A2

    Fig.  3  Sc-HSP90 gene identified and phylogenetic tree

    a. Multiple sequence alignment of HSP90 amino acid sequences from eight animals, HSP90 family signature motifs are red boxes and sequence MEEVD is underlined; b. the phylogenetic tree of HSP90 constructed by Neighbor-joining method using MEGA5.2 software. Accession numbers of the sequences used in construction of tree are attached in the appendix Table A2

    图  4  Sc-GSTσSc-HSP90基因在缢蛏不同组织中及不同氨浓度胁迫后的表达特征

    a1. Sc-GSTσ基因的组织表达;a2. 不同氨浓度胁迫后,Sc-GSTσ在缢蛏肝胰腺中的表达量变化;b1. Sc-HSP90基因的组织表达;b2. 不同氨浓度胁迫后,Sc-HSP90在缢蛏肝胰腺中的表达量变化。组织间不同字母的数据差异显著(p<0.05),星号(*)表示在各时间点胁迫组与对照组之间的显著差异(*p<0.05;**p<0.01;***p<0.001)

    Fig.  4  The expression characteristics of Sc-GSTσ and Sc-HSP90 genes in different tissues of S. constricta and after different ammonia concentration stress

    a1. Expression profile of Sc-GSTσ in S. constricta; a2. expression characteristic analysis of Sc-GSTσ in the digestive gland of S. constricta after ammonia stress; b1. expression profile of Sc-HSP90 in S. contricta; b2. expression characteristic analysis of Sc-HSP90 in the digestive gland of S. contricta data after ammonia stress. Different letters are significantly different among tissues (p<0.05) and the asterisk (*) indicates a significant difference between the stress group and its respective control at different time (*p<0.05; **p<0.01; ***p<0.001)

    表  1  本实验所用引物及序列信息

    Tab.  1  The information of primers and sequences used in this experiment

    引物名称序列(5′-3′)引物信息
    LongCTAATACGACTCACTATAGGGCAAGCAGTGGTATCAACGCAGAGTRACE扩增接头引物
    ShortCTAATACGACTCACTATAGGGCRACE扩增接头引物
    T3GAGAGTGCTCGCAACTTAGAAATCGCCGSc-GSTσ 3′RACE扩增
    T5CGGCATGTCTGGTTTCCGTTGGSc-GSTσ 5′RACE扩增
    P3CGCATCCCTCAATACTCTTGGTCGSc-HSP90 3′RACE扩增
    P5CCTCGTCTTCCTCCAAATCCTCTACCTTSc-HSP90 5′RACE扩增
    M13 FCGCCAGGGTTTTCCCAGTCACGACT1载体通用引物
    M13 RGAGCGGATAACAATTTCACACAGGT1载体通用引物
    T F1TGGAGTCTCTGGGTGATACGSc-GSTσ全长验证引物
    T R1ACAACAACGCTGAAACTGGASc-GSTσ全长验证引物
    T F2TTCTTGTGGAGCAGTACAGTTCTAASc-GSTσ全长验证引物
    T R2CAAAATCAAAAGGCTGTCGCSc-GSTσ全长验证引物
    P F1GTTTACTCAGAAAGACGCACGGSc-HSP90全长验证引物
    P R1CTACTACGACGCATAATGGAGCSc-HSP90全长验证引物
    P F2GGCTGCCAAGAAGAACCTASc-HSP90全长验证引物
    P R2AAATCACAGATTGAACAATCAAGTASc-HSP90全长验证引物
    RS9 FTGAAGTCTGGCGTGTCAAGT内参基因荧光定量引物
    RS9 RCGTCTCAAAAGGGCATTACC内参基因荧光定量引物
    GST FGAACCGACGAGAATCAGAAGASc-GSTσ荧光定量引物
    GST RAAACATCGCCGAAACCACGSc-GSTσ荧光定量引物
    HSP90 FGATGAAGGGGAGGTGGAAASc-HSP90荧光定量引物
    HSP90 RGTGTCAATGAGGGTCAGTGTGTSc-HSP90荧光定量引物
    下载: 导出CSV
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  • 收稿日期:  2019-05-27
  • 修回日期:  2019-08-21
  • 网络出版日期:  2020-11-18
  • 刊出日期:  2020-04-25

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